@article{CTT100715607,
  author = {Yasuo Tabei and Yoshihiro Yamanishi and Masaaki Kotera},
  title = {Simultaneous prediction of enzyme orthologs from chemical transformation patterns for de novo metabolic pathway reconstruction.},
  journal = {},
  year = 2016,
}

@article{CTT100704599,
  author = {Yuki Moriya and Takuji Yamada and Shujiro Okuda and Masaaki Kotera and Zenichi Nakagawa and Toshiaki Tokimatsu and Susumu Goto and Minoru Kanehisa},
  title = {Identification of Enzyme Genes Using Chemical Structure Alignments of Substrate-Product Pairs},
  journal = {Journal of Chemical Information and Modeling},
  year = 2016,
}

@article{CTT100704600,
  author = {Iwata Hiroaki and Sawada Ryusuke and Mizutani Sayaka and Kotera Masaaki and Yamanishi Yoshihiro},
  title = {Large-Scale Prediction of Beneficial Drug Combinations Using Drug Efficacy and Target Profiles},
  journal = {Journal of Chemical Information and Modeling},
  year = 2015,
}

@article{CTT100715615,
  author = {Yoshihiro Yamanishi and Yasuo Tabei and Masaaki Kotera},
  title = {Metabolome-scale de novo pathway reconstruction using regioisomer-sensitive graph alignments},
  journal = {Bioinformatics},
  year = 2015,
}

@article{CTT100715628,
  author = {Masaaki Kotera and Yosuke Nishimura and Zen-ichi Nakagawa and Ai Muto and Yuki Moriya and Shinobu Okamoto and Shuichi Kawashima and Toshiaki Katayama and Toshiaki Tokimatsu and Minoru Kanehisa and Susumu Goto},
  title = {PIERO ontology for analysis of biochemical transformations: Effective implementation of reaction information in the IUBMB Enzyme List},
  journal = {},
  year = 2014,
}

@article{CTT100715648,
  author = {Masaaki Kotera and Yasuo Tabei and Yoshihiro Yamanishi and Ai Muto and Yuki Moriya and Toshiaki Tokimatsu and Susumu Goto},
  title = {Metabolome-scale prediction of intermediate compounds in multistep metabolic pathways with a recursive supervised approach},
  journal = {Bioinformatics},
  year = 2014,
}

@article{CTT100715641,
  author = {Zhao Jin and Masaaki Kotera and Susumu Goto},
  title = {Virus proteins similar to human proteins as possible disturbance on human pathways.},
  journal = {Syst Synth Biol},
  year = 2014,
}

@inproceedings{CTT100715613,
  author = {Masaaki Kotera},
  title = {Simultaneous prediction of enzyme orthologs from chemical transformation patterns for de novo metabolic pathway reconstruction.},
  booktitle = {},
  year = 2016,
}

@inproceedings{CTT100704601,
  author = {Masaaki Kotera},
  title = {Metabolome-scale de novo pathway reconstruction using regioisomer-sensitive graph alignments},
  booktitle = {},
  year = 2015,
}

@inproceedings{CTT100704603,
  author = {Masaaki Kotera},
  title = {PIERO ontology for analysis of biochemical transformations: Effective implementation of reaction information in the IUBMB Enzyme List},
  booktitle = {},
  year = 2014,
}

@inproceedings{CTT100715643,
  author = {Masaaki Kotera},
  title = {Metabolome-scale prediction of intermediate compounds in multistep metabolic pathways with a recursive supervised approach},
  booktitle = {},
  year = 2014,
}

@misc{CTT100715598,
  author = {Masaaki Kotera and Susumu Goto},
  title = {Metabolic pathway reconstruction strategies for central metabolism and natural product biosynthesis},
  year = 2016,
}

@misc{CTT100715621,
  author = {小寺正明 and 五斗進},
  title = {教師付き学習法によるメタボローム規模での多段階代謝経路予測},
  year = 2015,
}

@misc{CTT100715630,
  author = {Ryusuke Sawada and Masaaki Kotera and Yoshihiro Yamanishi},
  title = {Benchmarking a wide range of chemical descriptors for drug-target interaction prediction using a chemogenomic approach.},
  year = 2014,
}